R Installation and more

 

* R installation




$sudo apt install r-base

 

* Package installation

install.packages('readr')

 

* install.packages('sf')

//Configuration failed because libudunits2.so was not found


sudo add-apt-repository ppa:ubuntugis/ubuntugis-unstable
sudo apt-get update
sudo apt-get install libudunits2-dev libgdal-dev libgeos-dev libproj-dev 

* install.packages('dplyr') //dataframe, works with R version >= 3.5

* install.packages('tidyverse') //Contains other packages (dplyr, ggplot2, etc.)  

* install.packages('spdep') //Spatial Dependence: Weighting Schemes, Statistics. A collection of functions to create spatial weights matrix objects from polygon

* install.packages('GGally') //extends 'ggplot2'

 

* install.packages('leaflet') //makes it easy to integrate and control Leaflet maps in R.

* install.packages('coda')

 

* install.packages('CARBayes')

* install.packages('CARBayesdata') 

 

* install.packages('xlsx')  

 

    dependences:

      1) java

      2) sudo apt-get install openjdk-11-jdk

      3) sudo R CMD javareconf    

      4) https://github.com/PCRE2Project/pcre2/releases  

      4.1) compilation https://www.appsloveworld.com/r/100/371/how-to-solve-lpcre2-8-error-while-installing-rjava-package-in-r


* install.packages('readxl')

 

* install.packages('tmap')


 

 

 

References:

[1] rstudio https://linuxconfig.org/rstudio-on-ubuntu-18-04-bionic-beaver-linux

[2] R 3.5 installation on Linux 18 https://rtask.thinkr.fr/installation-of-r-3-5-on-ubuntu-18-04-lts-and-tips-for-spatial-packages

[2] rstudio previous https://docs.posit.co/previous-versions/rstudio/